The Transposon Registry

Displaying 461 - 480 of 2084
Tn6147
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6148
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6149
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6150
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6151
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6152
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6153
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6154
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6155
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6156
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6157
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6158
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Tn6159
Dr Michael Mulvey
Public Health Agency of Canada
Tn6160
Dr Mark Toleman
Department of Infection, Immunity \\\\\\
Tn6161
Dr Naito Mariko
Nagasaki University
  • Efflux functions
Characteristics
Tn6161 (also called CTnPg1) is a 44,3-kb conjugative transposon, found in Porphyromonas gingivalis strain ATCC 33277. It was predicted to encode 50 CDSs (PGN_0046 to PGN_0095), including a set of genes for conjugative transfer and integration as well as those for a Na+-driven multi-drug efflux pump.
References

Naito M, Hirakawa H, Yamashita A, et al. Determination of the Genome Sequence of Porphyromonas gingivalis Strain ATCC 33277 and Genomic Comparison with Strain W83 Revealed Extensive Genome Rearrangements in P. gingivalis. DNA Research 15(4): 215-225. DOI: 10.1093/dnares/dsn013

Naito, M., et al. (2011). "Characterization of the Porphyromonas gingivalis conjugative transposon CTnPg1: determination of the integration site and the genes essential for conjugal transfer." Microbiology 157(Pt 7): 2022-2032. DOI: 10.1099/mic.0.047803-0

Accession number
Contact
Tn6162
Miss Elena Martinez
University of Technology, Sydney
  • Antibiotic Resistance
  • Spectinomycin
  • Streptomycin
  • Heavy Metal Resistance
  • Mercury Resistance
Characteristics
Tn6162 is a 26-kb Tn1403-like transposon, found in genomic island 1 of Pseudomonas aeruginosa. It contained Tn1403 transposition module, ISpA7, mercury resistance operon (merEDAPTR), and class 1 integron [containing sul1 gene in 3'CS, two gene cassettes (gcuD and aadA6), and integron integrase gene].
References

Martinez E, Marquez C, Ingold A, et al. Diverse Mobilized Class 1 Integrons Are Common in the Chromosomes of Pathogenic Pseudomonas aeruginosa Clinical Isolates. Antimicrobial Agents and Chemotherapy. 2012;56(4):2169-2172. DOI: 10.1128/AAC.06048-11.

Accession number
Contact
Tn6163
Miss Elena Martinez
University of Technology, Sydney
  • Antibiotic Resistance
  • Carbapenem
  • Kanamycin
  • Neomycin
  • Heavy Metal Resistance
  • Mercury Resistance
Characteristics
Tn6163 is a 21.2-kb Tn1403-like transposon, found in genomic island 2 of Pseudomonas aeruginosa. It contained Tn1403 transposition module, IS1071, IS6100, ISPa21e, IS4-like element, mercury resistance operon (merRTPADE), and class 1 integron [containing sul1 gene in 3'CS, four gene cassettes (aphA15, gcuE15, aacA4-like and blaGES-5 genes), and integron integrase gene].
References

Martinez E, Marquez C, Ingold A, et al. Diverse Mobilized Class 1 Integrons Are Common in the Chromosomes of Pathogenic Pseudomonas aeruginosa Clinical Isolates. Antimicrobial Agents and Chemotherapy. 2012;56(4):2169-2172. DOI: 10.1128/AAC.06048-11.

Accession number
Contact
Tn6164
Dr Jeroen Corver
Leiden University Medical Center
  • Antibiotic Resistance
  • Erythromycin
  • Streptomycin
  • Tetracycline
Characteristics
Tn6164 is a 106-kb transposon, found in Clostridium difficile strain M120 (PCR ribotype 078 strain). The 3’ end of Tn6164 is homologous to Tn1806 of Streptococcus pneumoniae [conferring erythromycin resistance], which appears to be the backbone into which several other elements have been inserted. The first 7.3 kb on the 5’ end of the insert contained 2 putative modification DNA methylases and a putative endonuclease. This sequence is followed by a 39.5-kb complete prophage, similar to a Thermoanaerobacter sp. prophage. The next 4.5 kb stretch is almost identical to part of the Enterococcus faecalis plasmid pEF418 containing, a putative methyltransferase and a putative spectinomycin adenyltransferase (ant(9)Ia). Finally, an insertion of approximately 4.5 kb is homologous to pathogenicity island of Campylobacter fetus subsp fetus, which contained putative tet(44) and ant(6)-Ib genes.
References

Corver J, Bakker D, Brouwer MSM, et al. Analysis of a Clostridium difficile PCR ribotype 078 100 kilobase island reveals the presence of a novel transposon, Tn6164BMC Microbiology. 2012;12:130. DOI: 10.1186/1471-2180-12-130.

Accession number
Contact
Tn6165
Dr Seputiene Vaida
Vilnius University
Tn6166
Prof Ruth Hall
The University of Sydney
  • Antibiotic Resistance
  • Streptomycin
  • Tetracycline
Characteristics
Tn6166 is a 17.6-kb transposon in comM of Acinetobacter baumannii GC2 type strain RUH134 (or A320). It carried Tn6022Δ1, the tet(B) tetracycline resistance determinant (derived from Tn10), and the strA and strB streptomycin resistance genes (derived from Tn5393).
References

Nigro, S. J. and R. M. Hall (2012). "Antibiotic resistance islands in A320 (RUH134), the reference strain for Acinetobacter baumannii global clone 2." J Antimicrob Chemother 67(2): 335-338. DOI: 10.1093/jac/dkr447

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