The Transposon Registry

Displaying 441 - 460 of 2084
Tn6127
Dr Jaroslaw Krol
University of Idaho
  • Metabolism
  • Chloroaniline degradation
Characteristics
Tn6127 is a 37.8-kb transposon, found in plasmid pTB30 from Comamonas testosteroni strain TB30. It contained three IS1071 elements, IS66, IS21 and degradation of chloroaniline (dca) gene cluster (dcaQTA1A2BR).
References

Król JE, Penrod JT, McCaslin H, et al. Role of IncP-1β Plasmids pWDL7::rfpand pNB8c in Chloroaniline Catabolism as Determined by Genomic and Functional Analyses. Applied and Environmental Microbiology. 2012;78(3):828-838. DOI: 10.1128/AEM.07480-11.

Accession number
Contact
jkrol@uidaho.edu
Tn6128
Dr Jaroslaw Krol
University of Idaho
Contact
jkrol@uidaho.edu
Tn6129
Dr Jaroslaw Krol
University of Idaho
Contact
jkrol@uidaho.edu
Tn6130
Dr Jaroslaw Krol
University of Idaho
  • Heavy Metal Resistance
  • Mercury Resistance
Characteristics
Tn6130 is a 15.6-kb transposon, found in plasmid pI2 Comamonas testosteroni strain I2. It contained mercury resistance gene cluster (merEDAPTR), tnpA7, tnpA8 and tnpR.
References

Boon N, Goris J, De Vos P, Verstraete W, Top EM. Genetic Diversity among 3-Chloroaniline- and Aniline-Degrading  Strains of the Comamonadaceae. Applied and Environmental Microbiology. 2001;67(3):1107-1115. DOI: 10.1128/AEM.67.3.1107-1115.2001.

Accession number
Contact
jkrol@uidaho.edu
Tn6131
Dr Jaroslaw Krol
University of Idaho
Contact
jkrol@uidaho.edu
Tn6132
Dr Jaroslaw Krol
University of Idaho
Contact
jkrol@uidaho.edu
Tn6133
Prof Vincent Perreten
Institute of Veterinary Bacteriology
  • Antibiotic Resistance
  • Clindamycin
  • Spectinomycin
  • Streptogramin A
  • Tiamulin
Characteristics
Tn6133 is an 11.5-kb Tn554-like transposon, found in Staphylococcus aureus (MRSA) ST398 Strain IMD49-10. It consisted of the Tn554 sequence [containing tnpABC, ant(9)-Ia and erm(A)] with an insertion of a 4.8-kb DNA fragment which contained 4 ORFs, encoding a putative recombinase and Vga(E) ABC transporters [conferring resistance to streptogramins A, pleuromutilins, and lincosamides].
References

Schwendener S, Perreten V. New Transposon Tn6133 in Methicillin-Resistant Staphylococcus aureus ST398 Contains vga(E), a Novel Streptogramin A, Pleuromutilin, and Lincosamide Resistance Gene. Antimicrobial Agents and Chemotherapy. 2011;55(10):4900-4904. DOI: 10.1128/AAC.00528-11.

Accession number
Contact
vincent.perreten@vetsuisse.unibe.ch
Tn6134
Dr Yuji Nagata
Tohoku University
  • Metabolism
  • Short-chain dehydrogenase/reductase
Characteristics
Tn6134 is a 4.6-kb Tn3-family transposon, found in chr1 of Sphingobium japonicum UT26. It contained tnpA, tnpR and sdr genes [encoding short-chain dehydrogenase/reductase (SDR) family protein].
References

Nagata, Y., et al. (2011). "Genomic organization and genomic structural rearrangements of Sphingobium japonicum UT26, an archetypal γ-hexachlorocyclohexane-degrading bacterium." Enzyme and Microbial Technology 49(6): 499-508. DOI: 10.1016/j.enzmictec.2011.10.005

Accession number
Contact
aynaga@ige.tohoku.ac.jp
Tn6135
Dr Yuji Nagata
Tohoku University
Characteristics
Tn6134 is a 4.3-kb Tn3-family transposon, found in chr1 of Sphingobium japonicum UT26. It contained 3 ORFs, encoding transposase, resolvase and putative acetyltransferase.
References

Nagata, Y., et al. (2011). "Genomic organization and genomic structural rearrangements of Sphingobium japonicum UT26, an archetypal γ-hexachlorocyclohexane-degrading bacterium." Enzyme and Microbial Technology 49(6): 499-508. DOI: 10.1016/j.enzmictec.2011.10.005

Accession number
Contact
aynaga@ige.tohoku.ac.jp
Tn6136
Dr Yuji Nagata
Tohoku University
Characteristics
Tn6136 is a 3.8-kb Tn3-family transposon, found in chr1 of Sphingobium japonicum UT26. It contained tnpA and tnpR and, encoding transposase and resolvase, respectively.
References

Nagata, Y., et al. (2011). "Genomic organization and genomic structural rearrangements of Sphingobium japonicum UT26, an archetypal γ-hexachlorocyclohexane-degrading bacterium." Enzyme and Microbial Technology 49(6): 499-508. DOI: 10.1016/j.enzmictec.2011.10.005

Accession number
Contact
aynaga@ige.tohoku.ac.jp
Tn6137
Dr Yuji Nagata
Tohoku University
Characteristics
Tn6137 is a 3.8-kb Tn3-family transposon, found in chr2 of Sphingobium japonicum UT26. It contained tnpA and tnpR and, encoding transposase and resolvase, respectively.
References

Nagata, Y., et al. (2011). "Genomic organization and genomic structural rearrangements of Sphingobium japonicum UT26, an archetypal γ-hexachlorocyclohexane-degrading bacterium." Enzyme and Microbial Technology 49(6): 499-508. DOI: 10.1016/j.enzmictec.2011.10.005

Accession number
Contact
aynaga@ige.tohoku.ac.jp
Tn6138
Dr Yuji Nagata
Tohoku University
  • Metabolism
  • Short-chain dehydrogenase/reductase
Characteristics
Tn6138 is a 4.6-kb Tn3-family transposon, found in plasmid pCHQ1 of Sphingobium japonicum UT26. It contained tnpA, tnpR and sdr genes [encoding short-chain dehydrogenase/reductase (SDR) family protein].
References

Nagata, Y., et al. (2011). "Genomic organization and genomic structural rearrangements of Sphingobium japonicum UT26, an archetypal γ-hexachlorocyclohexane-degrading bacterium." Enzyme and Microbial Technology 49(6): 499-508. DOI: 10.1016/j.enzmictec.2011.10.005

Accession number
Contact
aynaga@ige.tohoku.ac.jp
Tn6139
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Contact
mmergeay@sckcen.be
Tn6140
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Contact
mmergeay@sckcen.be
Tn6141
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Contact
mmergeay@sckcen.be
Tn6142
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Contact
mmergeay@sckcen.be
Tn6143
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Contact
mmergeay@sckcen.be
Tn6144
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Contact
mmergeay@sckcen.be
Tn6145
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Contact
mmergeay@sckcen.be
Tn6146
Prof Mergeay Max
SCK.CEN,Belgian Center for NuclearEnergy
Contact
mmergeay@sckcen.be

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